2008年
Ikezoe Y, Kumashiro Y, Tamada K, Matsui T, Yamashita I, Shiba K, Hara M
Giant growth of two-dimensional crystal of protein molecules from a three-phase contact line
Langmuir 24(22): 12836-12841 (2008)
Giant growth of two-dimensional crystal of protein molecules from a three-phase contact line
Langmuir 24(22): 12836-12841 (2008)
Tsuji T, Onuma K, Yamamoto A, Iijima Y, Shiba K
Direct transformation from amorphous to crystalline calcium phosphate facilitated by motif-programmed artificial proteins
Proc Natl Acad Sci USA 105(44): 16866-16870 (2008)
Direct transformation from amorphous to crystalline calcium phosphate facilitated by motif-programmed artificial proteins
Proc Natl Acad Sci USA 105(44): 16866-16870 (2008)
Sano K, Shiba K
Stepwise accumulation of layers of aptamer-ornamented ferritins using biomimetic Layer-By-Layer (BioLBL)
J Mater Res: 23 (12): 3236-40 (2008)
Stepwise accumulation of layers of aptamer-ornamented ferritins using biomimetic Layer-By-Layer (BioLBL)
J Mater Res: 23 (12): 3236-40 (2008)
Kokubun K, Kashiwagi K, Yoshinari M, Inoue T, Shiba K
Motif-programmed artificial extracellular matrix
Biomacromolecules 9(11): 3098-3105 (2008)
Motif-programmed artificial extracellular matrix
Biomacromolecules 9(11): 3098-3105 (2008)
Ishikawa K, Yamada K, Kumagai S, Sano K, Shiba K, Yamashita I, Kobayashi M
Adsorption properties of a gold-binding peptide assessed by its attachment to a recombinant apoferritin molecule
Applied Physics Express 1(3): 034006 (2008)
Adsorption properties of a gold-binding peptide assessed by its attachment to a recombinant apoferritin molecule
Applied Physics Express 1(3): 034006 (2008)
Saito H, Minamisawa T, Yamori T, Shiba K
Motif-programmed artificial protein induces apoptosis in several cancer cells by disrupting mitochondria
Cancer Science 99(2): 398-406 (2008)
Motif-programmed artificial protein induces apoptosis in several cancer cells by disrupting mitochondria
Cancer Science 99(2): 398-406 (2008)
Sano K, Shiba K
In aqua manufacturing of a three-dimensional nanostructure using a peptide aptamer
MRS Bulletin 33(5): 524-529 (2008)
In aqua manufacturing of a three-dimensional nanostructure using a peptide aptamer
MRS Bulletin 33(5): 524-529 (2008)
松村 幸子、湯田坂 雅子、飯島 澄男、芝 清隆
カーボンナノチューブでつくるメディカル・デバイス
バイオナノプロセス-溶液中でナノ構造を作るウエット・ナノテクノロジーの薦め- シーエムシー出版 286-300 (2008)
カーボンナノチューブでつくるメディカル・デバイス
バイオナノプロセス-溶液中でナノ構造を作るウエット・ナノテクノロジーの薦め- シーエムシー出版 286-300 (2008)
佐野 健一、芝 清隆
BioLBL法による in aqua での高次ナノ構造形成
バイオナノプロセス-溶液中でナノ構造を作るウエット・ナノテクノロジーの薦め- シーエムシー出版 249-256 (2008)
BioLBL法による in aqua での高次ナノ構造形成
バイオナノプロセス-溶液中でナノ構造を作るウエット・ナノテクノロジーの薦め- シーエムシー出版 249-256 (2008)
佐野 健一、芝 清隆
無機材料を標的にしたペプチド・アプタマーの異種界面形成
バイオナノプロセス-溶液中でナノ構造を作るウエット・ナノテクノロジーの薦め- シーエムシー出版 92-103 (2008)
無機材料を標的にしたペプチド・アプタマーの異種界面形成
バイオナノプロセス-溶液中でナノ構造を作るウエット・ナノテクノロジーの薦め- シーエムシー出版 92-103 (2008)
河村 秀樹、三浦 篤志、芝 清隆、山下 一郎
バイオナノプロセスをめぐる世界の動き
バイオナノプロセス-溶液中でナノ構造を作るウエット・ナノテクノロジーの薦め- シーエムシー出版 6-21 (2008)
バイオナノプロセスをめぐる世界の動き
バイオナノプロセス-溶液中でナノ構造を作るウエット・ナノテクノロジーの薦め- シーエムシー出版 6-21 (2008)
2007年
Sano K, Yoshii S, Yamashita I, Shiba K
In aqua structuralization of a three-dimensional configuration using biomolecules
Nano Letters 7(10) : 3200-3202 (2007)
In aqua structuralization of a three-dimensional configuration using biomolecules
Nano Letters 7(10) : 3200-3202 (2007)
Saito H, Kashida S, Inoue T, Shiba K
The role of peptide motifs in the evolution of a protein network
Nucleic Acid Res 35(19): 6357-6366 (2007)
The role of peptide motifs in the evolution of a protein network
Nucleic Acid Res 35(19): 6357-6366 (2007)
Shiba K, Minamisawa T
A synthesis approach to understanding repeated peptides conserved in mineralization proteins
Biomacromolecules 8(9) : 2659-2664 (2007)
A synthesis approach to understanding repeated peptides conserved in mineralization proteins
Biomacromolecules 8(9) : 2659-2664 (2007)
Matsumura S, Ajima K, Yudasaka M, Iijima S, Shiba K
Dispersion of cisplatin-loaded carbon nanohorns with a conjugate comprised of an artificial peptide aptamer and polyethylene glycol
Mol Pharm 4(5) : 723-729 (2007)
Dispersion of cisplatin-loaded carbon nanohorns with a conjugate comprised of an artificial peptide aptamer and polyethylene glycol
Mol Pharm 4(5) : 723-729 (2007)
Matsui T, Matsukawa N, Iwahori K, Sano K, Shiba K, Yamashita I
Direct production of a two-dimensional ordered array of ferritin-nanoparticles on a silicon substrate
Jpn J Appl Phys 46(28): L713-L715 (2007)
Direct production of a two-dimensional ordered array of ferritin-nanoparticles on a silicon substrate
Jpn J Appl Phys 46(28): L713-L715 (2007)
Kulp JL III, Minamisawa T, Shiba K, Tejani M, Evans JS
Structural properties of an artificial protein that regulates the nucleation of inorganic and organic crystals
Langmuir 23(7): 3857-3863 (2007)
Structural properties of an artificial protein that regulates the nucleation of inorganic and organic crystals
Langmuir 23(7): 3857-3863 (2007)
Saito H, Minamisawa T, Shiba K
Motif programming: a microgene-based method for creating synthetic proteins containing multiple functional motifs
Nucleic Acid Res 35(6): e38 (2007)
Motif programming: a microgene-based method for creating synthetic proteins containing multiple functional motifs
Nucleic Acid Res 35(6): e38 (2007)
Sano K, Sasaki H, Shiba K
Conversion of a monodispersed globular protein into an amyloid-like filament by appending an artificial peptide at the N-terminal
Protein Eng Des Sel 20(3): 109-116 (2007)
Conversion of a monodispersed globular protein into an amyloid-like filament by appending an artificial peptide at the N-terminal
Protein Eng Des Sel 20(3): 109-116 (2007)
Matsui T, Matsukawa N, Iwahori K, Sano K, Shiba K, Yamashita I
Realizing a two-dimensional ordered array of ferritin molecules directly on a solid surface utilizing carbonaceous materials-affinity peptides
Langmuir 23(4): 1615 -1618 (2007)
Realizing a two-dimensional ordered array of ferritin molecules directly on a solid surface utilizing carbonaceous materials-affinity peptides
Langmuir 23(4): 1615 -1618 (2007)
総説・解説など

林 智広、佐野 健一、芝 清隆、岩堀 健治、山下 一郎、原 正彦
原子間力顕微鏡を用いた無機物認識ペプチドのターゲット認識メカニズムの解明
表面科学 28(7): 391-396 (2007)
林 智広、佐野 健一、芝 清隆、岩堀 健治、山下 一郎、原 正彦
原子間力顕微鏡を用いた無機物認識ペプチドのターゲット認識メカニズムの解明
表面科学 28(7): 391-396 (2007)
Patwardhan SV, Shiba K, Schroeder HC, Mueller WEG, Clarson SJ, Perry CC
The role of bioinspired peptide and recombinant proteins in silica polymerization
Tne interaction of 'Silicon' with proteins: Part 2, Science and technology of silicones and silicone-modified materials, Clarson SJ et al ed. 328-347 (2007)
The role of bioinspired peptide and recombinant proteins in silica polymerization
Tne interaction of 'Silicon' with proteins: Part 2, Science and technology of silicones and silicone-modified materials, Clarson SJ et al ed. 328-347 (2007)
芝 清隆
無機材料結合ペプチド
表面 45(6): 185-199 (2007)
無機材料結合ペプチド
表面 45(6): 185-199 (2007)
芝 清隆、佐野 健一
金属結合ペプチドのミネラリゼーション活性を利用したナノ構造形成
『バイオミネラジゼーションとそれに倣う新機能材料の創製』 加藤隆史(監修) シーエムシー出版:273-287 (2007)
金属結合ペプチドのミネラリゼーション活性を利用したナノ構造形成
『バイオミネラジゼーションとそれに倣う新機能材料の創製』 加藤隆史(監修) シーエムシー出版:273-287 (2007)
Shiba K
Nanotubes, nanowires, nanocantilevers and nanorods in cancer treatment and diagnosis
Nanomaterials for cancer diagnosis- Nanotechnologies for the life siciences vol 7- Kumar, CSSR ed. 285-303 (2007)
Nanotubes, nanowires, nanocantilevers and nanorods in cancer treatment and diagnosis
Nanomaterials for cancer diagnosis- Nanotechnologies for the life siciences vol 7- Kumar, CSSR ed. 285-303 (2007)
2006年
Yamashita I, Kirimura H, Okuda M, Nishio K, Sano K, Shiba K, Hayashi T, Hara M, Mishima Y
Selective nanoscale positioning of ferritin and nanoparticles by means of target-specific peptides
Small 2(10): 1148-1152 (2006)
Selective nanoscale positioning of ferritin and nanoparticles by means of target-specific peptides
Small 2(10): 1148-1152 (2006)
Murakami T, Fan J, Yudasaka M, Iijima S, Shiba K
Solubilization of single-wall carbon nanohorns using a PEG-doxorubicin conjugate
Mol Pharmaceutics 3(4): 407-414 (2006)
Solubilization of single-wall carbon nanohorns using a PEG-doxorubicin conjugate
Mol Pharmaceutics 3(4): 407-414 (2006)
Hayashi T, Sano K, Shiba K, Kumashiro Y, Iwahori K, Yamashita I, Hara M
Mechanism underlying specificity of proteins targeting inorganic materials
Nano Lett 6(3): 515-519 (2006)
Mechanism underlying specificity of proteins targeting inorganic materials
Nano Lett 6(3): 515-519 (2006)
Sano K, Sasaki H, Shiba K
Utilization of the pleiotropy of a peptidic aptamer to fabricate heterogeneous nano-dot-containing multilayer nanostructures
J Am Chem Soc 128(5): 1717-1722 (2006)
Utilization of the pleiotropy of a peptidic aptamer to fabricate heterogeneous nano-dot-containing multilayer nanostructures
J Am Chem Soc 128(5): 1717-1722 (2006)
Kashiwagi K, Isogai Y, Nishiguchi K, Shiba K
Frame shuffling: a novel method for in vitro protein evolution
Protein Eng Des Sel 19(3): 135-140 (2006)
Frame shuffling: a novel method for in vitro protein evolution
Protein Eng Des Sel 19(3): 135-140 (2006)
総説・解説など

芝 清隆
結晶成長を人工タンパク質で制御する
日本結晶成長学会誌 33(5):381-387 (2006)
芝 清隆
結晶成長を人工タンパク質で制御する
日本結晶成長学会誌 33(5):381-387 (2006)
Shiba K
Functionalization of carbon nanomaterials by evolutionary molecular engineering: potential application in drug delivery system
J Drug Target 14(7):512-8 (2006)
Functionalization of carbon nanomaterials by evolutionary molecular engineering: potential application in drug delivery system
J Drug Target 14(7):512-8 (2006)
佐野 健一、芝 清隆
人工ペプチドを利用したナノ多層薄膜形成法
Bionics 3(4): 72-73 (2006)
人工ペプチドを利用したナノ多層薄膜形成法
Bionics 3(4): 72-73 (2006)
2005年
Ajima K, Yudasaka M, Murakami T, Maigne A, Shiba K, Iijima S
Carbon nanohorns as anticancer drug carriers
Mol Pharmaceutics 2(6): 475-480 (2005)
Carbon nanohorns as anticancer drug carriers
Mol Pharmaceutics 2(6): 475-480 (2005)
Kulp JL III, Shiba K, Evans JS
Probing the conformational features of a phage display polypeptide sequence directed against single wall carbon nanohorn surfaces
Langmuir 21(25): 11907-11914 (2005)
Probing the conformational features of a phage display polypeptide sequence directed against single wall carbon nanohorn surfaces
Langmuir 21(25): 11907-11914 (2005)
Sano K, Ajima K, Iwahori K, Yudasaka M, Iijima S, Yamashita I, Shiba K
Endowing a ferritin-like cage protein with high affinity and selectivity for certain inorganic materials
Small 1 (8-9): 826-832 (2005)
Endowing a ferritin-like cage protein with high affinity and selectivity for certain inorganic materials
Small 1 (8-9): 826-832 (2005)
Patwardhan SV, Shiba K, Raab C, Huesing N, Clarson SJ
Protein-mediated bioinspired mineralization
Polymer biocatalysis and biomaterials in ACS symposium series 900 ed. Chang H N and Gross R A, pp150-163 American Chemical Society (2005)
Protein-mediated bioinspired mineralization
Polymer biocatalysis and biomaterials in ACS symposium series 900 ed. Chang H N and Gross R A, pp150-163 American Chemical Society (2005)
Sano K, Sasaki H, Shiba K
Specificity and biomineralization activities of Ti-binding peptide-1 (TBP-1)
Langmuir 21(7): 3090-3095 (2005) [pdf]
Specificity and biomineralization activities of Ti-binding peptide-1 (TBP-1)
Langmuir 21(7): 3090-3095 (2005) [pdf]
総説・解説など

湯田坂 雅子、村上 達也、安嶋 久美子、宮脇 仁、芝 清隆、飯島 澄男
カーボンナノチューブとカーボンナノホーンのDDS応用
PHARM TECH JAPAN 21(12): 2108-2112 (2005)
湯田坂 雅子、村上 達也、安嶋 久美子、宮脇 仁、芝 清隆、飯島 澄男
カーボンナノチューブとカーボンナノホーンのDDS応用
PHARM TECH JAPAN 21(12): 2108-2112 (2005)
芝 清隆
遺伝子はどこまで創れるか?
生命化学研究レター19: 3-8 (2005)
遺伝子はどこまで創れるか?
生命化学研究レター19: 3-8 (2005)
Shiba K
Glycyl-tRNA synthetase
in Aminoacyl-tRNA Syntehtases eds. Ibba M, Francklyn C, Cusack S. Eurekah/Landes Bioscience (2005)
Glycyl-tRNA synthetase
in Aminoacyl-tRNA Syntehtases eds. Ibba M, Francklyn C, Cusack S. Eurekah/Landes Bioscience (2005)
2004年
Murakami T, Ajima K, Miyawaki J, Yudasaka M, Iijima S, Shiba K
Drug-loaded carbon nanohorns: adsorption and release of dexamethasone in vitro
Mol Pharmaceutics 1(6): 399-405 (2004) [pdf]
Drug-loaded carbon nanohorns: adsorption and release of dexamethasone in vitro
Mol Pharmaceutics 1(6): 399-405 (2004) [pdf]
Kase D, Kulp III JL, Yudasaka M, Evans JS, Iijima S, Shiba K
Affinity selection of peptide phage libraries against single-wall carbon nanohorns identifies a peptide aptamer with conformational variability
Langmuir 20(20): 8939-8941 (2004) [pdf]
Affinity selection of peptide phage libraries against single-wall carbon nanohorns identifies a peptide aptamer with conformational variability
Langmuir 20(20): 8939-8941 (2004) [pdf]
Ramaswamy K, Saito H, Murakami H, Shiba K, Suga H
Designer ribozymes: programming the tRNA specificity into flexizyme
J Am Chem Soc 126(37): 11454-11455 (2004)
Designer ribozymes: programming the tRNA specificity into flexizyme
J Am Chem Soc 126(37): 11454-11455 (2004)
Halwani R, Cen S, Javanbakht H, Saadatmand J, Kim S, Shiba K, Kleiman L
Cellular distribution of lysyl-tRNA synthetase and its interaction with gag during human immunodeficiency virus type 1 assembly
J Viol 78(14): 7553-7564 (2004)
Cellular distribution of lysyl-tRNA synthetase and its interaction with gag during human immunodeficiency virus type 1 assembly
J Viol 78(14): 7553-7564 (2004)
Saito H, Honma T, Minamisawa T, Yamazaki K, Noda T, Yamori T, Shiba K
Synthesis of functional proteins by mixing peptide motifs
Chem Biol 11(6): 765-773 (2004)
Synthesis of functional proteins by mixing peptide motifs
Chem Biol 11(6): 765-773 (2004)
Shiba K
: a hierarchical approach to the synthesis of artificial proteins
J Mol Catal B 28(4-6): 145-153 (2004)
J Mol Catal B 28(4-6): 145-153 (2004)
Kashiwagi K, Shiba K
Combinatorics of peptide sextets encoded by a single microgene
J Mol Catal B 28(4-6): 215-221 (2004)
Combinatorics of peptide sextets encoded by a single microgene
J Mol Catal B 28(4-6): 215-221 (2004)
Kashiwagi K, Fukami-Kobayashi K, Shiba K, Nishikawa K
Construction and characterization of chimeric proteins composed of type-1 and type-2 periplasmic binding proteins MglB and ArgT
Biosci Biotec Biochem 68(4): 808-813 (2004)
Construction and characterization of chimeric proteins composed of type-1 and type-2 periplasmic binding proteins MglB and ArgT
Biosci Biotec Biochem 68(4): 808-813 (2004)
総説・解説など

Shiba K
Artificial proteins that interface between biological and inorganic materials
J Photopolymer Science and Technology 17(3): 409-410 (2004)
Shiba K
Artificial proteins that interface between biological and inorganic materials
J Photopolymer Science and Technology 17(3): 409-410 (2004)
齊藤 博英、芝 清隆
システムバイオロジーとコンビナトリアル・バイオエンジニアリングの融合 -コンビナトリアル・システムエンジニアリングにむけて-
コンビナトリアル・バイオエンジニアリングの最前線 植田充美 監修 シーエムシー出版: 324-335 (2004)
システムバイオロジーとコンビナトリアル・バイオエンジニアリングの融合 -コンビナトリアル・システムエンジニアリングにむけて-
コンビナトリアル・バイオエンジニアリングの最前線 植田充美 監修 シーエムシー出版: 324-335 (2004)
2003年
Kase D, Shiba K, Jin Zhu, Kasuya D, Yudasaka M, Iijima S
Toward development of nano-materials composed of artificial proteins and nano-carbons
Nanotechnology, 2003. IEEE-NANO 2003. 2003 Third IEEE Conference on 2003 1(2): 386- 389 (2003)
Toward development of nano-materials composed of artificial proteins and nano-carbons
Nanotechnology, 2003. IEEE-NANO 2003. 2003 Third IEEE Conference on 2003 1(2): 386- 389 (2003)
Sano K, Shiba K
A hexapeptide motif that electrostatically binds to the surface of titanium
J Am Chem Soc 125(47): 14234-14235 (2003) [pdf]
A hexapeptide motif that electrostatically binds to the surface of titanium
J Am Chem Soc 125(47): 14234-14235 (2003) [pdf]
Zhu J, Kase D, Shiba K, Kasuya D, Yudasaka M, Iijima S
Binary nanomaterials based on nanocarbons: a case for probing carbon nanohorns' biorecognition properties
Nano Lett 3(8): 1033-1038 (2003)
Binary nanomaterials based on nanocarbons: a case for probing carbon nanohorns' biorecognition properties
Nano Lett 3(8): 1033-1038 (2003)
Kashiwagi K, Shiba K, Fukami-Kobayashi K, Noda T, Nishikawa K, Noguchi H
Characterization of folding pathways of the type-1 and type-2 periplasmic binding proteins MglB and ArgT
J Biochem 133(3): 371-376(2003)
Characterization of folding pathways of the type-1 and type-2 periplasmic binding proteins MglB and ArgT
J Biochem 133(3): 371-376(2003)
Shiba K, Shirai T, Honma T, Noda T
Translated products of tandem microgene repeats exhibit diverse properties also seen in natural proteins
Protein Engn 16(1): 57-63 (2003)
Translated products of tandem microgene repeats exhibit diverse properties also seen in natural proteins
Protein Engn 16(1): 57-63 (2003)
Shiba K, Honma T, Minamisawa T, Nishiguchi K, Noda T
Distinct macroscopic structures developed from solutions of chemical compounds and periodic proteins
EMBO Reports 4(2): 148-153 (2003)
Distinct macroscopic structures developed from solutions of chemical compounds and periodic proteins
EMBO Reports 4(2): 148-153 (2003)
芝 清隆
汎用性高い人工たんぱく質合成技術『
』
日経先端技術 no 50 18-21 (2003)
汎用性高い人工たんぱく質合成技術『
日経先端技術 no 50 18-21 (2003)
芝 清隆
無機マテリアルに働きかけるタンパク質
ナノバイオテクノロジーの最前線 植田充美 監修 シーエムシー出版 125-136 (2003)
無機マテリアルに働きかけるタンパク質
ナノバイオテクノロジーの最前線 植田充美 監修 シーエムシー出版 125-136 (2003)
芝 清隆
:階層的進化を模した人工蛋白質創出法
蛋白質核酸酵素8月号増刊 化学と生物学の接点がつくるNewバイオテクノロジー 多比良和誠・菅 裕明 編 共立出版48(11): 1503-1510 (2003)
蛋白質核酸酵素8月号増刊 化学と生物学の接点がつくるNewバイオテクノロジー 多比良和誠・菅 裕明 編 共立出版48(11): 1503-1510 (2003)
芝 清隆
ゲノム時代の人工タンパク質研究
日本農芸化学会誌 77 (7): 13-16 (2003)
ゲノム時代の人工タンパク質研究
日本農芸化学会誌 77 (7): 13-16 (2003)
芝 清隆
高分子マイクロ遺伝子重合体の作成方法
特許3415995号 出願人:科学技術振興事業団 4月4日(2003)
高分子マイクロ遺伝子重合体の作成方法
特許3415995号 出願人:科学技術振興事業団 4月4日(2003)
芝 清隆
マイクロ遺伝子のタンデム重合
化学フロンティア9 コンビナトリアル・バイオエンジニアリング-情報から機能の創造をめざして 植田・近藤編 化学同人 pp67-71 (2003)
マイクロ遺伝子のタンデム重合
化学フロンティア9 コンビナトリアル・バイオエンジニアリング-情報から機能の創造をめざして 植田・近藤編 化学同人 pp67-71 (2003)
2002年
Shiba K
Intron positions delineate the evolutionary path of a pervasively appended peptide in five human aminoacyl-tRNA synthetases
J Mol Evol 55(6): 727-733 (2002)
Intron positions delineate the evolutionary path of a pervasively appended peptide in five human aminoacyl-tRNA synthetases
J Mol Evol 55(6): 727-733 (2002)
Cen S, Javanbakht H, Kim S, Shiba K, Craven R, Rein A, Ewalt K, Schimmel P, Musier-Forsyth K, Kleiman L
Retrovirus-specific packaging of aminoacyl-tRNA synthetases with cognate primer tRNAs
J Virol 76(24): 13111-13115 (2002)
Retrovirus-specific packaging of aminoacyl-tRNA synthetases with cognate primer tRNAs
J Virol 76(24): 13111-13115 (2002)
Shiba K, Hatada T, Takahashi Y, Noda T
Guide oligonucleotide-dependent DNA linkage that facilitates controllable polymerization of microgene blocks
J Biochem 132(5): 689-696 (2002)
Guide oligonucleotide-dependent DNA linkage that facilitates controllable polymerization of microgene blocks
J Biochem 132(5): 689-696 (2002)
Shiba K, Takahashi Y, Noda T
On the role of periodism in the origin of proteins
J Mol Biol 320(4): 833-840 (2002)
On the role of periodism in the origin of proteins
J Mol Biol 320(4): 833-840 (2002)
Wong FC, Beuning P, Nagan M, Shiba K, Musier-Forsyth K
Functional role of the prokaryotic proline-tRNA synthetase insertion domain in amino acid editing
Biochemistry 41(22): 7108-7115 (2002)
Functional role of the prokaryotic proline-tRNA synthetase insertion domain in amino acid editing
Biochemistry 41(22): 7108-7115 (2002)
2001年
Miyaki M, Iijima T, Shiba K, Aki T, Kita Y, Yasuno M, Mori T, Kuroki T, Iwama T
Alterations of repeated sequences in 5' upstream and coding regions in colorectal tumors from patients with hereditary nonpolyposis colorectal cancer and Turcot syndrome
Oncogene 20(37): 5215-5218 (2001)
Alterations of repeated sequences in 5' upstream and coding regions in colorectal tumors from patients with hereditary nonpolyposis colorectal cancer and Turcot syndrome
Oncogene 20(37): 5215-5218 (2001)
Burke B, Lipman RS, Shiba K, Musier-Forsyth K, Hou YM
Divergent adaptation of tRNA recognition by Methanococcus jannaschii prolyl-tRNA synthetase
J Biol Chem 276(23): 20286-20291(2001)
Divergent adaptation of tRNA recognition by Methanococcus jannaschii prolyl-tRNA synthetase
J Biol Chem 276(23): 20286-20291(2001)
Cen S, Khorchid A, Javanbakht H, Gabor J, Stello T, Shiba K, Musier-Forsyth K, Kleiman L
Incorporation of lysyl-tRNA synthetase into human immunodeficiency virus type 1
J Virol 75(11): 5043-5048 (2001)
Incorporation of lysyl-tRNA synthetase into human immunodeficiency virus type 1
J Virol 75(11): 5043-5048 (2001)
2000年
Kim JE, Kim KH, Lee SW, Seol W, Shiba K, Kim S
Elongation factor-associating domain is inserted into human cysteinyl-tRNA synthetase by alternative splicing
Nucl Acids Res 28: 2866-2872 (2000)
Elongation factor-associating domain is inserted into human cysteinyl-tRNA synthetase by alternative splicing
Nucl Acids Res 28: 2866-2872 (2000)
芝 清隆
既存遺伝子資源に依存しない機能性分子(人工遺伝子)の創出
技術予測シリーズ:21世紀に期待される技術~その将来展望 第4巻 pp1-8 日本ビジネスレポート
既存遺伝子資源に依存しない機能性分子(人工遺伝子)の創出
技術予測シリーズ:21世紀に期待される技術~その将来展望 第4巻 pp1-8 日本ビジネスレポート
1999年
Hou YM, Motegi H, Lipman, RSA, Hamann CS, Shiba K
Conservation of a tRNA core for aminoacylation
Nucl Acids Res 27(24): 4743-4750 (1999)
Conservation of a tRNA core for aminoacylation
Nucl Acids Res 27(24): 4743-4750 (1999)
Michaels J-EA, Shiba K, Miller WT
Autonomous folding of a C-terminal inhibitory fragment of Escerichia coli isoleucine-tRNA synthetase
Biochimica Biophysica Acta 1433: 103-109 (1999)
Autonomous folding of a C-terminal inhibitory fragment of Escerichia coli isoleucine-tRNA synthetase
Biochimica Biophysica Acta 1433: 103-109 (1999)
芝 清隆
DNA進化論 ~遺伝情報はいかにして誕生・進化を遂げてきたか~
薬事日報 平成11年7月5日(9160): 22-23
DNA進化論 ~遺伝情報はいかにして誕生・進化を遂げてきたか~
薬事日報 平成11年7月5日(9160): 22-23
Park SG, Jung KH, Lee JS, Jo YJ, Motegi H, Kim S, Shiba K
Precursor of pro-apoptotic cytokine modulates aminoacylation activity of tRNA synthetase
J Biol Chem 274(24): 16673-16676 (1999)
Precursor of pro-apoptotic cytokine modulates aminoacylation activity of tRNA synthetase
J Biol Chem 274(24): 16673-16676 (1999)
Rho SB, Kim MJ, Lee JS, Seol W, Motegi H, Kim S, Shiba K
Genetic dissection of protein-protein interactions in a multi-tRNA synthetase complex
Proc Natl Acad Sci U S A 96(8): 4488-4493 (1999)
Genetic dissection of protein-protein interactions in a multi-tRNA synthetase complex
Proc Natl Acad Sci U S A 96(8): 4488-4493 (1999)
1998年
Shiba K, Motegi H, Yoshida M, Noda T
Human asparaginyl-tRNA synthetase: Molecular cloning and the inference of the evolutionary history of Asx-tRNA synthetase family
Nucl Acids Res 26(22): 5045-5051 (1998)
Human asparaginyl-tRNA synthetase: Molecular cloning and the inference of the evolutionary history of Asx-tRNA synthetase family
Nucl Acids Res 26(22): 5045-5051 (1998)
Chihade JW, Hayashibara H, Shiba K, Schimmel P
Strong selective pressure to use G:U to mark an RNA acceptor stem for alanine
Biochemistry 37(25): 9193-9202 (1998)
Strong selective pressure to use G:U to mark an RNA acceptor stem for alanine
Biochemistry 37(25): 9193-9202 (1998)
Stehlin C, Burke B, Liu H, Shiba K, Musier-Forsyth K
Species-specific differences in the operational RNA code for aminoacylation of tRNAPro
Biochemistry 37(23): 8605-8613 (1998)
Species-specific differences in the operational RNA code for aminoacylation of tRNAPro
Biochemistry 37(23): 8605-8613 (1998)
Kim S, Jo Y -J, Lee SH, Shiba K, Motegi H, Sassanfar M, Martinis SA
Biochemical and phylogenetic analyses of methionyl-tRNA synthetase isolated from a pathogenic microorganism, Mycobacterium tuberculosis.
FEBS lett 427(2): 259-262 (1998)
Biochemical and phylogenetic analyses of methionyl-tRNA synthetase isolated from a pathogenic microorganism, Mycobacterium tuberculosis.
FEBS lett 427(2): 259-262 (1998)
Shiba K
In vitro constructive approaches to the origin of coding sequences
J Biochem Mol Biol 31(3): 209-220 (1998)
In vitro constructive approaches to the origin of coding sequences
J Biochem Mol Biol 31(3): 209-220 (1998)
芝 清隆
アミノアシルtRNA合成酵素から見たゲノム形成のダイナミクス
細胞工学 17(5): 771-780 (1998)
アミノアシルtRNA合成酵素から見たゲノム形成のダイナミクス
細胞工学 17(5): 771-780 (1998)
芝 清隆
試験管の中での遺伝子の誕生
アカデミア 173(1): 34-44 (1998)
試験管の中での遺伝子の誕生
アカデミア 173(1): 34-44 (1998)
1997年
芝 清隆
今がチャンス!
生物物理 37: 147 (1997)
今がチャンス!
生物物理 37: 147 (1997)
Shiba K, Motegi H, Schimmel P
Maintaining genetic code through adaptations of tRNA synthetases to taxonomic domains
Trends Biochem Sci 22(12): 453-457 (1997)
Maintaining genetic code through adaptations of tRNA synthetases to taxonomic domains
Trends Biochem Sci 22(12): 453-457 (1997)
Shibata H, Toyama K, Shioya H, Ito M, Hirota M, Hasegawa S, Matsumoto H, Takano H, Akiyama T, Toyoshima K, Kanamaru R, Kanegae Y, Saito I, Nakamura Y, Shiba K, Noda T
Rapid colorectal adenoma formation initiated by conditional targeting of the Apcgene
Science 278(5335): 120-123 (1997)
Rapid colorectal adenoma formation initiated by conditional targeting of the Apcgene
Science 278(5335): 120-123 (1997)
芝 清隆
DNAに秘められた進化のなぞ
Newton 17 (11) (1997)
DNAに秘められた進化のなぞ
Newton 17 (11) (1997)
Shiba K, Stello T, Motegi H, Musier-Forsyth K, Noda T, Shimmel P
Human lysyl-tRNA synthetase accepts nucleotide 73 variants and rescues Escherichia coli double-defective mutant
J Biol Chem 272(36): 22809-22816 (1997)
Human lysyl-tRNA synthetase accepts nucleotide 73 variants and rescues Escherichia coli double-defective mutant
J Biol Chem 272(36): 22809-22816 (1997)
Terunuma A, Shiba K, Noda T
A novel genetic system to isolate a dominant negative effector on DNA-binding activity of Oct-2
Nucl Acids Res 25(10): 1984-1990 (1997)
A novel genetic system to isolate a dominant negative effector on DNA-binding activity of Oct-2
Nucl Acids Res 25(10): 1984-1990 (1997)
Shiba K, Takahashi Y, Noda T
Creation of libraries with long open reading frames by polymerization of a microgene
Proc Natl Acad Sci U S A 94(8): 3805-3810 (1997)
Creation of libraries with long open reading frames by polymerization of a microgene
Proc Natl Acad Sci U S A 94(8): 3805-3810 (1997)
1996年
芝 清隆
マイクロ遺伝子を組み合わせて新しいタンパク質を創造できるか?
バイオサイエンスとインダストリー 54(12): 863-864 (1996)
マイクロ遺伝子を組み合わせて新しいタンパク質を創造できるか?
バイオサイエンスとインダストリー 54(12): 863-864 (1996)
Michaels J-EA, Schimmel P, Shiba K, Miller WT
Dominant negative inhibition by fragments of a monomeric enzyme
Proc Natl Acad Sci U S A 93(25): 14452-14455 (1996)
Dominant negative inhibition by fragments of a monomeric enzyme
Proc Natl Acad Sci U S A 93(25): 14452-14455 (1996)
Heacock D, Forsyth CJ, Shiba K, Musier-Forsyth K
Synthesis and aminoacyl-tRNA synthetase inhibitory activity of prolyl adenylate analogs
Bioorganic Chemistry 24: 273-289 (1996) 別刷り品切れ
Synthesis and aminoacyl-tRNA synthetase inhibitory activity of prolyl adenylate analogs
Bioorganic Chemistry 24: 273-289 (1996) 別刷り品切れ
Rho SB, Lee KH, Kim JW, Shiba K, Jo YJ, Kim S
Interaction between human tRNA synthetases involves repeated sequence elements
Proc Natl Acad Sci U S A 93(19): 10128-10133 (1996)
Interaction between human tRNA synthetases involves repeated sequence elements
Proc Natl Acad Sci U S A 93(19): 10128-10133 (1996)
Shiba K, Hatada T, Noda T
Combinatorial assembly of micro-genes
Protein Engineering 9: 813-814 (1996)
Combinatorial assembly of micro-genes
Protein Engineering 9: 813-814 (1996)
Sassanfar M, Kranz JE, Gallant P, Schimmel P, Shiba K
A eubacterial Mycobacterium tuberculosis tRNA synthetase is eukaryote-like and resistant to a eubacterial-specific antisynthetase drug
Biochemistry 35(31): 9995-10003 (1996)
A eubacterial Mycobacterium tuberculosis tRNA synthetase is eukaryote-like and resistant to a eubacterial-specific antisynthetase drug
Biochemistry 35(31): 9995-10003 (1996)
1995年
Nakai S, Kawano H, Yudate T, Nishi M, Kuno J, Nagata A, Jishage K, Fujii H, Hamada H, Kawamura K, Shiba K, Noda T
The POU domain transcription factor Brn-2 is required for the determination of specific neuronal lineages in the hypothalamous of the mouse
Genes Dev 9: 3109-3121 (1995)
The POU domain transcription factor Brn-2 is required for the determination of specific neuronal lineages in the hypothalamous of the mouse
Genes Dev 9: 3109-3121 (1995)
Shiba K, Rimpmaster T, Suzuki N, Nichols R, Plotz P, Noda T, Schimmel P
Human alanyl-tRNA synthetase: conservation in evolution of catalytic core and microhelix recognition
Biochemistry 34(33): 10340-10349 (1995)
Human alanyl-tRNA synthetase: conservation in evolution of catalytic core and microhelix recognition
Biochemistry 34(33): 10340-10349 (1995)
Hipps D, Shiba K, Henderson B, Schimmel P
Operational RNA code for amino acids: species-specific aminoacylation of minihelices switched by a single nucleotide
Proc Natl Acad Sci U S A 92(12): 5550-5552 (1995)
Operational RNA code for amino acids: species-specific aminoacylation of minihelices switched by a single nucleotide
Proc Natl Acad Sci U S A 92(12): 5550-5552 (1995)
Shiba K
Dissection of an enzyme into two fragments at intron-exon boundaries
in Tracing biological evolution in protein and gene structures: 11-21 Elsevier Science B. V.(1995)
Dissection of an enzyme into two fragments at intron-exon boundaries
in Tracing biological evolution in protein and gene structures: 11-21 Elsevier Science B. V.(1995)
Ripmaster TL, Shiba K, Henderson B, Schimmel P
Wide cross-species aminoacyl-tRNA synthetase replacement in vivo: yeast cytoplasmic alanine enzyme replaced by human polymyositis serum antigen
Proc Natl Acad Sci U S A 92(11): 4932-4936 (1995)
Wide cross-species aminoacyl-tRNA synthetase replacement in vivo: yeast cytoplasmic alanine enzyme replaced by human polymyositis serum antigen
Proc Natl Acad Sci U S A 92(11): 4932-4936 (1995)
Matsuhisa A, Suzuki N, Noda T, Shiba K
Inositol monophosphatase activity from the Escherichia coli suhB gene product
J Bacteriol 177(1): 200-205 (1995)
Inositol monophosphatase activity from the Escherichia coli suhB gene product
J Bacteriol 177(1): 200-205 (1995)
1994年
Shiba K, Schimmel P, Motegi H, Noda T
Human glycyl-tRNA synthetase. Wide divergence of primary structure from bacterial counterpart and species-specific aminoacylation
J Biol Chem 269(47): 30049-30055 (1994)
Human glycyl-tRNA synthetase. Wide divergence of primary structure from bacterial counterpart and species-specific aminoacylation
J Biol Chem 269(47): 30049-30055 (1994)
Shiba K, Suzuki N, Shigesada K, Namba Y, Schimmel P, Noda T
Human cytoplasmic isoleucyl-tRNA synthetase: selective divergence of the anticodon-binding domain and acquisition of a new structural unit
Proc Natl Acad Sci U S A 91(16): 7435-7439 (1994)
Human cytoplasmic isoleucyl-tRNA synthetase: selective divergence of the anticodon-binding domain and acquisition of a new structural unit
Proc Natl Acad Sci U S A 91(16): 7435-7439 (1994)
Matsuhisa A, Kishi Y, Shiba K
A simple staining method for dna and rna blotted on a membrane using a polyethyleneimine-enzyme conjugate
J Biochem 116(3): 478-81 (1994)
A simple staining method for dna and rna blotted on a membrane using a polyethyleneimine-enzyme conjugate
J Biochem 116(3): 478-81 (1994)
1993年- NO PAPER
1992年
Schimmel P, Shepard A, Shiba K
Intron locations and functional deletions in relation to the design and evolution of a subgroup of class I tRNA synthetases
Protein Sci 1(10): 1387-91 (1992)
Intron locations and functional deletions in relation to the design and evolution of a subgroup of class I tRNA synthetases
Protein Sci 1(10): 1387-91 (1992)
Shiba K, Schimmel P
Tripartite functional assembly of a large class I aminoacyl tRNA synthetase
J Biol Chem 267(32): 22703-6 (1992)
Tripartite functional assembly of a large class I aminoacyl tRNA synthetase
J Biol Chem 267(32): 22703-6 (1992)
Shepard A, Shiba K, Schimmel P
RNA binding determinant in some class I tRNA synthetases identified by alignment-guided mutagenesis
Proc Natl Acad Sci U S A 89(20): 9964-8 (1992)
RNA binding determinant in some class I tRNA synthetases identified by alignment-guided mutagenesis
Proc Natl Acad Sci U S A 89(20): 9964-8 (1992)
Taura T, Ueguchi C, Shiba K, Ito K
Insertional disruption of the nusB (ssyB) gene leads to cold-sensitive growth of Escherichia coli and suppression of the secY24 mutation
Mol Gen Genet 234(3): 429-32 (1992)
Insertional disruption of the nusB (ssyB) gene leads to cold-sensitive growth of Escherichia coli and suppression of the secY24 mutation
Mol Gen Genet 234(3): 429-32 (1992)
Shiba K, Schimmel P
Functional assembly of a randomly cleaved protein
Proc Natl Acad Sci U S A 89(5): 1880-4 (1992)
Functional assembly of a randomly cleaved protein
Proc Natl Acad Sci U S A 89(5): 1880-4 (1992)
1991年
Asano K, Kato A, Moriwaki H, Hama C, Shiba K, Mizobuchi K
Positive and negative regulations of plasmid CoLIb-P9 repZ gene expression at the translational level
J Biol Chem 266(6): 3774-81 (1991)
Positive and negative regulations of plasmid CoLIb-P9 repZ gene expression at the translational level
J Biol Chem 266(6): 3774-81 (1991)
Hou Y-M, Shiba K, Mottes C, Schimmel P
Sequence determination and modeling of structural motifs for the smallest monomeric aminoacyl-tRNA synthetase
Proc Natl Acad Sci U S A 88(3): 976-80 (1991)
Sequence determination and modeling of structural motifs for the smallest monomeric aminoacyl-tRNA synthetase
Proc Natl Acad Sci U S A 88(3): 976-80 (1991)
1990年
Yano R, Nagai H, Shiba K, Yura T
A mutation that enhances synthesis of sigma 32 and suppresses temperature-sensitive growth of the rpoH15 mutant of Escherichia coli
J Bacteriol 172(4): 2124-30 (1990)
A mutation that enhances synthesis of sigma 32 and suppresses temperature-sensitive growth of the rpoH15 mutant of Escherichia coli
J Bacteriol 172(4): 2124-30 (1990)
Shiba K, Mizobuchi, K
Posttranscriptional control of plasmid ColIb-P9 repZ gene expression by a small RNA
J Bacteriol 172(10): 1992-7 (1990)
Posttranscriptional control of plasmid ColIb-P9 repZ gene expression by a small RNA
J Bacteriol 172(10): 1992-7 (1990)
1987年-1989年 ECLIPSE
1986年
Shiba K, Ito K, Nakamura Y, Dondon J, Grunberg-Manago M
Altered translation initiation factor 2 in the cold-sensitive ssyG mutant affects protein export in Escherichia coli
EMBO J 5(11): 3001-6 (1986)
Altered translation initiation factor 2 in the cold-sensitive ssyG mutant affects protein export in Escherichia coli
EMBO J 5(11): 3001-6 (1986)
Bacallao R, Crooke E, Shiba K, Wickner W, Ito K
The secY protein can act post-translationally to promote bacterial protein export
J Biol Chem 261(27): 12907-10 (1986)
The secY protein can act post-translationally to promote bacterial protein export
J Biol Chem 261(27): 12907-10 (1986)
Ito K, Akiyama Y, Yura T, Shiba K
Diverse effects of the MalE-LacZ hybrid protein on Escherichia coli cell physiology
J Bacteriol 167(1): 201-4 (1986)
Diverse effects of the MalE-LacZ hybrid protein on Escherichia coli cell physiology
J Bacteriol 167(1): 201-4 (1986)
Shiba K, Ito K, Yura T
Suppressors of the secY24 mutation: identification and characterization of additional ssy genes in Escherichia coli
J Bacteriol 166(3): 849-56 (1986)
Suppressors of the secY24 mutation: identification and characterization of additional ssy genes in Escherichia coli
J Bacteriol 166(3): 849-56 (1986)
1985年
伊藤 維昭、芝 清隆、秋山 芳展
タンパク質の局在化
細胞工学 4(13): 1172-1184 (1985)
タンパク質の局在化
細胞工学 4(13): 1172-1184 (1985)
芝 清隆, 伊藤 維昭
タンパク質の膜透過機構とその遺伝制御
化学と生物 23(3): 186-191 (1985)
タンパク質の膜透過機構とその遺伝制御
化学と生物 23(3): 186-191 (1985)
1984年
Shiba K, Ito K, Yura T
Mutation that suppresses the protein export defect of the secY mutation and causes cold-sensitive growth of Escherichia coli
J Bacteriol 160(2): 696-701 (1984)
Mutation that suppresses the protein export defect of the secY mutation and causes cold-sensitive growth of Escherichia coli
J Bacteriol 160(2): 696-701 (1984)
Shiba K, Ito K, Yura T, Cerretti, DP
A defined mutation in the protein export gene within the spc ribosomal protein operon of Escherichia coli: isolation and characterization of a new temperature-sensitive secY mutant
EMBO J 3(3): 631-5 (1984)
A defined mutation in the protein export gene within the spc ribosomal protein operon of Escherichia coli: isolation and characterization of a new temperature-sensitive secY mutant
EMBO J 3(3): 631-5 (1984)
1983年
Ito K, Wittekind M, Nomura M, Shiba K, Yura T, Miura A, Nashimoto H
A temperature-sensitive mutant of E. coli exhibiting slow processing of exported proteins
Cell 32(3): 789-97(1983)
A temperature-sensitive mutant of E. coli exhibiting slow processing of exported proteins
Cell 32(3): 789-97(1983)
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